hits

By Tom Grant

Hauptman-Woodward Institute

'hits' is a python script that can be used to quickly calculate hits and hit rates from a series of different experimental runs from an SFX experiment when using Cheetah for hit finding.

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Version 1.0.1 - published on 04 04, 2015

Licensed under CC0 - Creative Commons

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hits_lys_screenshot.png
Abstract

‘hits’ is a python script that can be used to quickly calculate hits and hit rates from a series of different experimental runs from an SFX experiment when using Cheetah for hit finding.

It uses Cheetah’s crawler.txt file to calculate hits. By default it will use your own crawler.txt file, provided you have set the environment variable $H5DIR, otherwise it will ask for the path or you can add it as an option with -i.

With no parameters given it will simply calculate all the hits found so far and the hit rate from all runs. However, you can also give it a space separated list of runs, and can use shell expansion to do so. You can also give it a tag and it will add up all the hits from that tag only.

usage: hits -h I R [R …] T

optional arguments:

-h, —help show this help message and exit
-i I Cheetah GUI crawler.txt file path (optional, will use $H5DIR
environment variable to find it otherwise)
-r R run numbers (optional, space delimited list)
-t T tag (optional)
Tags
  1. Data Analysis

Supporting Docs

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