A user-friendly plug-and-play cyclic olefin copolymer-based microfluidic chip for room-temperature, fixed-target serial crystallography

By Zhongrui Liu, Kevin Gu1, Megan Shelby2, Deepshika Gilbile, Artem Y. Lyubimov, Silvia Russi, Aina E. Cohen, Sankar Raju Narayanasamy3, Sabine Botha4, Christopher Kupitz5, Raymond G. Sierra, Fredric Poitevin, Antonio Gilardi, Stella Lisova, Matthew Coleman6, Matthias Frank2, Tonya L. Kuhl

1. University of California - Davis 2. Lawrence Livermore National Laboratory 3. Stanford University 4. Arizona State University 5. SLAC National Accelerator Laboratory 6. Radiation Oncology, Cancer Center

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Type

journal-article

Author

Zhongrui Liu and Kevin K. Gu and Megan L. Shelby and Deepshika Gilbile and Artem Y. Lyubimov and Silvia Russi and Aina E. Cohen and Sankar Raju Narayanasamy and Sabine Botha and Christopher Kupitz and Raymond G. Sierra and Fredric Poitevin and Antonio Gilardi and Stella Lisova and Matthew A. Coleman and Matthias Frank and Tonya L. Kuhl

Citation

Liu, Z., Gu, K. K., Shelby, M. L., Gilbile, D., Lyubimov, A. Y., Russi, S., Cohen, A. E., Narayanasamy, S. R., Botha, S., Kupitz, C., Sierra, R. G., Poitevin, F., Gilardi, A., Lisova, S., Coleman, M. A., Frank, M., & Kuhl, T. L. (2023). A user-friendly plug-and-play cyclic olefin copolymer-based microfluidic chip for room-temperature, fixed-target serial crystallography. Acta Crystallographica Section D Structural Biology, 79(10), 944–952. https://doi.org/10.1107/s2059798323007027

Abstract

Over the past two decades, serial X-ray crystallography has enabled the structure determination of a wide range of proteins. With the advent of X-ray free-electron lasers (XFELs), ever-smaller crystals have yielded high-resolution diffraction and structure determination. A crucial need to continue advancement is the efficient delivery of fragile and micrometre-sized crystals to the X-ray beam intersection. This paper presents an improved design of an all-polymer microfluidic `chip' for room-temperature fixed-target serial crystallography that can be tailored to broadly meet the needs of users at either synchrotron or XFEL light sources. The chips are designed to be customized around different types of crystals and offer users a friendly, quick, convenient, ultra-low-cost and robust sample-delivery platform. Compared with the previous iteration of the chip [Gilbile et al. (2021), Lab Chip, 21, 4831–4845], the new design eliminates cleanroom fabrication. It has a larger imaging area to volume, while maintaining crystal hydration stability for both in situ crystallization or direct crystal slurry loading. Crystals of two model proteins, lysozyme and thaumatin, were used to validate the effectiveness of the design at both synchrotron (lysozyme and thaumatin) and XFEL (lysozyme only) facilities, yielding complete data sets with resolutions of 1.42, 1.48 and 1.70 Å, respectively. Overall, the improved chip design, ease of fabrication and high modifiability create a powerful, all-around sample-delivery tool that structural biologists can quickly adopt, especially in cases of limited sample volume and small, fragile crystals.

DOI

Funding

NSF-STC Biology with X-ray Lasers (NSF-1231306)